Spot the difference: comparing results of analyses from real patient data and synthetic derivatives

Author:

Foraker Randi E12ORCID,Yu Sean C2,Gupta Aditi2,Michelson Andrew P3,Pineda Soto Jose A4,Colvin Ryan24,Loh Francis5,Kollef Marin H3,Maddox Thomas6,Evanoff Bradley1,Dror Hovav7,Zamstein Noa7,Lai Albert M12ORCID,Payne Philip R O12ORCID

Affiliation:

1. Division of General Medical Sciences, Department of Medicine, School of Medicine, Washington University in St. Louis, St. Louis, Missouri, USA

2. Department of Medicine, Institute for Informatics, School of Medicine, Washington University in St. Louis, St. Louis, Missouri, USA

3. Division of Pulmonary and Critical Care Medicine, Department of Medicine, School of Medicine, Washington University in St. Louis, St. Louis, Missouri, USA

4. Division of Critical Care Medicine, Department of Anesthesiology and Critical Care Medicine, Children’s Hospital of Los Angeles, Los Angeles, California, USA

5. School of Medicine, Washington University in St. Louis, St. Louis, Missouri, USA

6. Healthcare Innovation Lab, BJC Healthcare, School of Medicine, Washington University in St. Louis, St. Louis, Missouri, USA

7. MDClone Ltd, Beer Sheva, Israel

Abstract

Abstract Background Synthetic data may provide a solution to researchers who wish to generate and share data in support of precision healthcare. Recent advances in data synthesis enable the creation and analysis of synthetic derivatives as if they were the original data; this process has significant advantages over data deidentification. Objectives To assess a big-data platform with data-synthesizing capabilities (MDClone Ltd., Beer Sheva, Israel) for its ability to produce data that can be used for research purposes while obviating privacy and confidentiality concerns. Methods We explored three use cases and tested the robustness of synthetic data by comparing the results of analyses using synthetic derivatives to analyses using the original data using traditional statistics, machine learning approaches, and spatial representations of the data. We designed these use cases with the purpose of conducting analyses at the observation level (Use Case 1), patient cohorts (Use Case 2), and population-level data (Use Case 3). Results For each use case, the results of the analyses were sufficiently statistically similar (P > 0.05) between the synthetic derivative and the real data to draw the same conclusions. Discussion and conclusion This article presents the results of each use case and outlines key considerations for the use of synthetic data, examining their role in clinical research for faster insights and improved data sharing in support of precision healthcare.

Funder

WUSM-Pediatric Neurocritical Care Program

Publisher

Oxford University Press (OUP)

Subject

Health Informatics

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