Single-cell transcriptomic Atlas of aging macaque ocular outflow tissues

Author:

Wu Jian12ORCID,Wang Chaoye3ORCID,Sun Shuhui456ORCID,Ren Tianmin1ORCID,Pan Lijie1ORCID,Liu Hongyi1ORCID,Hou Simeng1ORCID,Wu Shen1ORCID,Yan Xuejing1ORCID,Zhang Jingxue1ORCID,Zhao Xiaofang7ORCID,Liu Weihai7ORCID,Zhu Sirui1ORCID,Wei Shuwen1,Zhang Chi1ORCID,Jia Xu2ORCID,Zhang Qi2ORCID,Yu Ziyu8ORCID,Zhuo Yehong2ORCID,Zhao Qi3ORCID,Yang Chenlong67ORCID,Wang Ningli1ORCID

Affiliation:

1. Beijing Institute of Ophthalmology, Beijing Tongren Eye Center, Beijing Tongren Hospital, Capital Medical University, Beijing Key Laboratory of Ophthalmology and Visual Sciences , Beijing 100730 , China

2. State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University , Guangzhou 510060 , China

3. State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University Cancer Center , Guangzhou 510060 , China

4. State Key Laboratory of Membrane Biology, Institute of Zoology, Chinese Academy of Sciences , Beijing 100101 , China

5. Beijing Institute for Stem Cell and Regenerative Medicine , Beijing 100101 , China

6. Institute for Stem Cell and Regeneration, Chinese Academy of Sciences , Beijing 100101 , China

7. Department of Neurosurgery, Peking University Third Hospital, Center for Precision Neurosurgery and Oncology of Peking University Health Science Center , Beijing 100191 , China

8. Spencer Center for Vision Research, Byers Eye Institute, School of Medicine, Stanford University , Palo Alto, CA 94304 , USA

Abstract

Abstract The progressive degradation in the trabecular meshwork (TM) is related to age-related ocular diseases like primary open-angle glaucoma. However, the molecular basis and biological significance of the aging process in TM have not been fully elucidated. Here, we established a dynamic single-cell transcriptomic landscape of aged macaque TM, wherein we classified the outflow tissue into 12 cell subtypes and identified mitochondrial dysfunction as a prominent feature of TM aging. Furthermore, we divided TM cells into 13 clusters and performed an in-depth analysis on cluster 0, which had the highest aging score and the most significant changes in cell proportions between the two groups. Ultimately, we found that the APOE gene was an important differentially expressed gene in cluster 0 during the aging process, highlighting the close relationship between cell migration and extracellular matrix regulation, and TM function. Our work further demonstrated that silencing the APOE gene could increase migration and reduce apoptosis by releasing the inhibition on the PI3K-AKT pathway and downregulating the expression of extracellular matrix components, thereby increasing the aqueous outflow rate and maintaining intraocular pressure within the normal range. Our work provides valuable insights for future clinical diagnosis and treatment of glaucoma.

Funder

Beijing Traditional Chinese Medicine Technology Development Fund

National Natural Science Foundation of China

Beijing Municipal Natural Science Foundation

Capital Health Research and Development of Special

Clinical Medicine Plus X-Young Scholars Project

Peking University

Fundamental Research Funds

Central Universities

Publisher

Oxford University Press (OUP)

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