No Evidence for Widespread Positive Selection Signatures in Common Risk Alleles Associated with Schizophrenia

Author:

Yao Yao123,Yang Jia4,Xie Yimin3,Liao Hai2,Yang Baoying5,Xu Qi4,Rao Shuquan24

Affiliation:

1. State Key Laboratory of Biotherapy and Collaborative Innovation Center for Biotherapy, West China Second University Hospital, Sichuan University, Chengdu, China

2. School of Life Science and Engineering, Southwest Jiaotong University, Chengdu, China

3. School of Basic Medicine, Chengdu University of Traditional Chinese Medicine, Chengdu, China

4. State Key Laboratory of Medical Molecular Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China

5. College of Mathematics, Southwest Jiaotong University, Chengdu, China

Abstract

Abstract Schizophrenia poses an evolutionary-genetic paradox as it exhibits strongly negative fitness effects (early mortality and decreased fecundity), yet it persists at a prevalence of approximately 1% worldwide. Evidence from several studies have suggested that schizophrenia is evolved and maintained in part as a maladaptive byproduct of recent positive selection and adaptive evolution in human beings. However, inconsistent results have been also proposed, challenging the recent positive selection theory to explain the high population frequency of schizophrenia-associated alleles. Here, we used public domain data to locate signatures of positive selection based on genetic diversity, derived allele frequency, differentiation between populations, and long haplotypes at schizophrenia-associated single nucleotide polymorphisms (SNPs) and randomly selected SNPs (as negative controls). We found evidence for positive selection at 10 out of the 105 schizophrenia-associated SNPs, while 5 of these SNPs involved positive selection for the protective allele. Taken together, the absence of widespread positive selection signals at the schizophrenia-associated SNPs, along with the fact that half of the positive selection favored the protective allele, provide little evidence supporting the positive selection theory in schizophrenia.

Funder

Sichuan Province Science and Technology Support Program

Fundamental Research Funds for the Central Universities

Publisher

Oxford University Press (OUP)

Subject

Psychiatry and Mental health

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