RNA/DNA ratios as estimate of metabolic and functional traits in diatom species from the northwestern Adriatic Sea

Abstract

Abstract Different phytoplankton biomass estimations can provide information about abundance variation, but they are not able to describe the metabolic activity of species or groups within assemblages. Conversely, molecular traits are key for the metabolic dynamics in pelagic ecosystems. To investigate if the RNA/DNA and taxon-specific 18S ribosomal RNA (rRNA)/ribosomal DNA (rDNA) ratios could be used to assess and be indicators of metabolic activity in marine phytoplankton species, two Adriatic diatom species, Chaetoceros socialis and Skeletonema marinoi, were studied. Significant correlations between abundance, chlorophyll a, carbon content and proteins were found in individual and co-cultured growth experiments (from rs = 0.570 to rs = 0.986, P < 0.001). The biomass trend followed a logistic curve without providing additional information regarding diatom metabolic activity. In both experiments, the RNA/DNA and taxon-specific 18S rRNA/rDNA ratios of C. socialis and S. marinoi showed maximum values at the beginning of the growth phase, i.e as 23.2 ± 1.5 and 15.3 ± 0.8, and 16.2 ± 1.6 and 30.1 ± 5.4 after 2 and 6 days, respectively, in individual cultures, with a subsequent significant decrease in these values for both species in individual and co-culture experiments. Our results showed that these molecular rRNA/rDNA ratios expressed an activation of metabolism before the abundance increases, even in the presence of interspecific interaction between C. socialis and S. marinoi.