Species boundaries in the Trichophyton mentagrophytes / T. interdigitale species complex

Author:

Pchelin Ivan M12,Azarov Daniil V3,Churina Maria A45,Scherbak Sergey G46,Apalko Svetlana V4,Vasilyeva Natalya V12,Taraskina Anastasia E1

Affiliation:

1. Kashkin Research Institute of Medical Mycology, North-Western State Medical University named after I.I. Mechnikov, St. Petersburg, Russia

2. Department of Medical Microbiology, North-Western State Medical University named after I.I. Mechnikov, St. Petersburg, Russia

3. Department of Epidemiology, Parasitology and Disinfectology, North-Western State Medical University named after I.I. Mechnikov, St. Petersburg, Russia

4. City Hospital No. 40, St. Petersburg, Russia

5. Clinical Infectious Diseases Hospital named after S.P. Botkin, St. Petersburg, Russia

6. Medical Faculty, Saint Petersburg State University, St. Petersburg, Russia

Abstract

AbstractThe fungi Trichophyton mentagrophytes and T. interdigitale are closely related species, causing superficial infections in humans and other mammals. The status of these taxa is a field of long-lasting debates. To clarify their phylogenetic relationships within the genus Trichophyton and sharpen the species boundaries, we performed sequencing of four T. mentagrophytes genomes and also evaluated three previously published multilocus data sets. We performed computational species delimitation analysis on all available in GenBank internal transcribed spacer region (ITS) sequences of Trichophyton spp. Phylogenomic data, phylogenetic network, and species delimitation analyses implied that T. mentagrophytes and T. interdigitale belong to the same phylogenetic species. However, we argue that taxonomic status quo should be retained, from the perspective of epidemiological data and the principle of taxonomic stability. Since there is a correlation between ITS genotype and epidemiological source of an isolate, restriction of T. interdigitale to purely anthropophilic ITS genotypes seems to be reasonable.

Funder

Russian Foundation for Basic Research

Publisher

Oxford University Press (OUP)

Subject

Infectious Diseases,General Medicine

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