KCND2 variants associated with global developmental delay differentially impair Kv4.2 channel gating

Author:

Zhang Yongqiang12,Tachtsidis Georgios1,Schob Claudia3,Koko Mahmoud4,Hedrich Ulrike B S4,Lerche Holger4,Lemke Johannes R56,van Haeringen Arie7,Ruivenkamp Claudia7,Prescott Trine8,Tveten Kristian8,Gerstner Thorsten910,Pruniski Brianna11,DiTroia Stephanie12,VanNoy Grace E12,Rehm Heidi L12,McLaughlin Heather13,Bolz Hanno J1415,Zechner Ulrich1416,Bryant Emily17,McDonough Tiffani17,Kindler Stefan3,Bähring Robert1

Affiliation:

1. Center for Experimental Medicine, Institute for Cellular and Integrative Physiology, University Hospital Hamburg-Eppendorf, 20246 Hamburg, Germany

2. Southeast University, Nanjing 210009, China

3. Institute for Human Genetics, University Hospital Hamburg-Eppendorf, 20246 Hamburg, Germany

4. Department of Neurology and Epileptology, Hertie-Institute for Clinical Brain Research, University of Tübingen, 72076 Tübingen, Germany

5. Institute of Human Genetics, University of Leipzig Medical Center, 04103 Leipzig, Germany

6. Center for Rare Diseases, University of Leipzig Medical Center, 04103 Leipzig, Germany

7. Department of Clinical Genetics, Leiden University Medical Center, 2333 Leiden, The Netherlands

8. Department of Medical Genetics, Telemark Hospital Trust, 3710 Skien, Norway

9. Department of Child Neurology and Rehabilitation, Hospital of Southern Norway, 4838 Arendal, Norway

10. Department of Pediatrics, Hospital of Southern Norway, 4838 Arendal, Norway

11. Division of Genetics & Metabolism, Phoenix Children’s Medical Group, Phoenix, AZ 85016, USA

12. Center for Mendelian Genomics and Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA

13. Invitae Corporation, San Francisco, CA 94103, USA

14. Senckenberg Centre for Human Genetics, 60314 Frankfurt/Main, Germany

15. Institute of Human Genetics, University Hospital of Cologne, 50931 Cologne, Germany

16. Institute of Human Genetics, University Medical Center Mainz, 55131 Mainz, Germany

17. Department of Pediatrics, Ann & Robert H. Lurie Children’s Hospital of Chicago, Northwestern University Feinberg School of Medicine, Chicago, IL 60611, USA

Abstract

Abstract Here, we report on six unrelated individuals, all presenting with early-onset global developmental delay, associated with impaired motor, speech and cognitive development, partly with developmental epileptic encephalopathy and physical dysmorphisms. All individuals carry heterozygous missense variants of KCND2, which encodes the voltage-gated potassium (Kv) channel α-subunit Kv4.2. The amino acid substitutions associated with the variants, p.(Glu323Lys) (E323K), p.(Pro403Ala) (P403A), p.(Val404Leu) (V404L) and p.(Val404Met) (V404M), affect sites known to be critical for channel gating. To unravel their likely pathogenicity, recombinant mutant channels were studied in the absence and presence of auxiliary β-subunits under two-electrode voltage clamp in Xenopus oocytes. All channel mutants exhibited slowed and incomplete macroscopic inactivation, and the P403A variant in addition slowed activation. Co-expression of KChIP2 or DPP6 augmented the functional expression of both wild-type and mutant channels; however, the auxiliary β-subunit-mediated gating modifications differed from wild type and among mutants. To simulate the putative setting in the affected individuals, heteromeric Kv4.2 channels (wild type + mutant) were studied as ternary complexes (containing both KChIP2 and DPP6). In the heteromeric ternary configuration, the E323K variant exhibited only marginal functional alterations compared to homomeric wild-type ternary, compatible with mild loss-of-function. By contrast, the P403A, V404L and V404M variants displayed strong gating impairment in the heteromeric ternary configuration, compatible with loss-of-function or gain-of-function. Our results support the etiological involvement of Kv4.2 channel gating impairment in early-onset monogenic global developmental delay. In addition, they suggest that gain-of-function mechanisms associated with a substitution of V404 increase epileptic seizure susceptibility.

Funder

Wellcome Trust

Chan Zuckerberg Initiative to the Rare Genomes Project

National Human Genome Research Institute

China Scholarship Council

Deutsche Forschungsgemeinschaft

Publisher

Oxford University Press (OUP)

Subject

Genetics(clinical),Genetics,Molecular Biology,General Medicine

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