Inferring direct DNA binding from ChIP-seq-Reference-Cited by-同舟云学术

Inferring direct DNA binding from ChIP-seq

Published:2012-05-18 Issue:17 Volume:40 Page:e128-e128
ISSN:1362-4962
Container-title:Nucleic Acids Research
language:en
Short-container-title:

Author:

Bailey Timothy L.¹,Machanick Philip¹

Affiliation:

1. Institute for Molecular Bioscience, The University of Queensland, Brisbane 4072, Queensland, Australia and 2 Department of Computer Science, Rhodes University, Grahamstown 6140, South Africa

Publisher

Oxford University Press (OUP)

Subject

Genetics

Link

http://academic.oup.com/nar/article-pdf/40/17/e128/25348192/gks433.pdf

Reference32 articles.

1. Evaluation of algorithm performance in ChIP-seq peak detection;Wilbanks;PLoS One,2010

2. Inferring transcription factor complexes from ChIP-seq data;Whitington;Nucleic Acids Res,2011

3. DREME: motif discovery in transcription factor ChIP-seq data;Bailey;Bioinformatics,2011

4. Information content and free energy in DNA–protein interactions;Stormo;J. Theor. Biol.,1998

5. Genome-wide identification of in vivo protein-DNA binding sites from ChIP-Seq data;Jothi;Nucleic Acids Res.,2008

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