Exploring N6-methyladenosine (m6A) modification in tree species: opportunities and challenges

Author:

Ramakrishnan Muthusamy1,Rajan K Shanmugha2,Mullasseri Sileesh3,Ahmad Zishan1,Zhou Mingbing45,Sharma Anket4,Ramasamy Subbiah6,Wei Qiang1

Affiliation:

1. Nanjing Forestry University State Key Laboratory of Tree Genetics and Breeding, Co-Innovation Center for Sustainable Forestry in Southern China, Bamboo Research Institute, Key Laboratory of National Forestry and Grassland Administration on Subtropical Forest Biodiversity Conservation, School of Life Sciences, , Nanjing 210037, Jiangsu, China

2. Weizmann Institute of Science Department of Chemical and Structural Biology, , 7610001 Rehovot, Israel

3. Department of Zoology, St. Albert’s College (Autonomous) , Kochi, 682018, Kerala, India

4. Bamboo Industry Institute State Key Laboratory of Subtropical Silviculture, , Zhejiang A&F University, Lin’an, Hangzhou 311300, Zhejiang, China

5. Zhejiang Provincial Collaborative Innovation Center for Bamboo Resources and High-Efficiency Utilization, Zhejiang A&F University, Lin’an , Hangzhou 311300, Zhejiang, China

6. Madurai Kamaraj University Cardiac Metabolic Disease Laboratory, Department of Biochemistry, School of Biological Sciences, , Madurai 625 021, Tamilnadu, India

Abstract

Abstract N6-methyladenosine (m6A) in eukaryotes is the most common and widespread internal modification in mRNA. The modification regulates mRNA stability, translation efficiency, and splicing, thereby fine-tuning gene regulation. In plants, m6A is dynamic and critical for various growth stages, embryonic development, morphogenesis, flowering, stress response, crop yield, and biomass. Although recent high-throughput sequencing approaches have enabled the rapid identification of m6A modification sites, the site-specific mechanism of this modification remains unclear in trees. In this review, we discuss the functional significance of m6A in trees under different stress conditions and discuss recent advancements in the quantification of m 6A. Quantitative and functional insights into the dynamic aspect of m 6A modification could assist researchers in engineering trees crop for better productivity and resistance to various stress conditions.

Publisher

Oxford University Press (OUP)

Subject

Horticulture,Plant Science,Genetics,Biochemistry,Biotechnology

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