Conservative plumage masks extraordinary phylogenetic diversity in the Grallaria rufula (Rufous Antpitta) complex of the humid Andes

Author:

Chesser R Terry12,Isler Morton L2,Cuervo Andrés M34,Cadena C Daniel5,Galen Spencer C26,Bergner Laura M6,Fleischer Robert C6,Bravo Gustavo A7,Lane Daniel F4,Hosner Peter A289

Affiliation:

1. U.S. Geological Survey, Patuxent Wildlife Research Center, Laurel, Maryland, USA

2. Division of Birds, Department of Vertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington, D.C., USA

3. Instituto de Ciencias Naturales, Universidad Nacional de Colombia, Bogotá, Colombia

4. Museum of Natural Science, Louisiana State University, Baton Rouge, Louisiana, USA

5. Laboratorio de Biología Evolutiva de Vertebrados, Departamento de Ciencias Biológicas, Universidad de los Andes, Bogotá, Colombia

6. Center for Conservation Genomics, Smithsonian Conservation Biology Institute, National Zoological Park, Washington, D.C., USA

7. Department of Organismic and Evolutionary Biology and Museum of Comparative Zoology, Harvard University, Cambridge, Massachusetts, USA

8. University of Kansas Biodiversity Institute, Lawrence, Kansas, USA

9. Department of Biology, University of Florida, Gainesville, Florida, USA

Abstract

Abstract The Grallaria rufula complex is currently considered to consist of 2 species, G. rufula (Rufous Antpitta) and G. blakei (Chestnut Antpitta). However, it has been suggested that the complex, populations of which occur in humid montane forests from Venezuela to Bolivia, comprises a suite of vocally distinct yet morphologically cryptic species. We sequenced nuclear and mitochondrial DNA for 80 individuals from across the distribution of the complex to determine the extent of genetic variation between and within described taxa. Our results revealed 18 geographically coherent clades separated by substantial genetic divergence: 14 within rufula, 3 within blakei, and 1 corresponding to G. rufocinerea (Bicolored Antpitta), a species with distinctive plumage found to be nested within the complex. Neither G. rufula nor G. blakei as presently defined was monophyletic. Although 6 of the 7 recognized subspecies of G. rufula were monophyletic, several subspecies contained substantial genetic differentiation. Genetic variation was largely partitioned across recognized geographic barriers, especially across deep river valleys in Peru and Colombia. Coalescent modeling identified 17 of the 18 clades as significantly differentiated lineages, whereas analyses of vocalizations delineated 16 biological species within the complex. The G. rufula complex seems unusually diverse even among birds of the humid Andes, a prime location for cryptic speciation; however, the extent to which other dispersal-limited Andean species groups exhibit similar degrees of cryptic differentiation awaits further study.

Funder

National Science Foundation

Publisher

Oxford University Press (OUP)

Subject

Animal Science and Zoology,Ecology, Evolution, Behavior and Systematics

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