Evaluation of RT-LAMP Assay for Rapid Detection of SARS-CoV-2

Author:

Li Ya-Ping12,Cao Xun-Jie13,Luo Xin13,Xie Tian-Ao13,Liu Wan-Jun12,Xie Shi-Ming14,Lin Min15,Guo Xu-Guang13678

Affiliation:

1. Department of Clinical Laboratory Medicine, The Third Affiliated Hospital of Guangzhou Medical University , Guangzhou , China

2. Department of Clinical Medicine, The Second Clinical School of Guangzhou Medical University , Guangzhou , China

3. Department of Clinical Medicine, The Third Clinical School of Guangzhou Medical University , Guangzhou , China

4. Department of Clinical Medicine, The First Clinical School of Guangzhou Medical University , Guangzhou , China

5. Department of Chinese and Western Medicine in Clinical Medicine, The Clinical School of Chinese and Western Medicine of Guangzhou Medical University , Guangzhou , China

6. Guangdong Provincial Key Laboratory of Major Obstetric Diseases, The Third Affiliated Hospital of Guangzhou Medical University , Guangzhou , China

7. Key Laboratory of Reproduction and Genetics of Guangdong Higher Education Institutes, The Third Affiliated Hospital of Guangzhou Medical University , Guangzhou , China

8. Guangzhou Key Laboratory for Clinical Rapid Diagnosis and Early Warning of Infectious Diseases, KingMed School of Laboratory Medicine, Guangzhou Medical University , Guangzhou , China

Abstract

Abstract Objective To evaluate the accuracy of the reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay for rapid detection of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in community or primary-care settings. Method We systematically searched the Web of Science, Embase, PubMed, and Cochrane Library databases. We conducted quality evaluation using ReviewManager software (version 5.0). We then used MetaDisc software (version 1.4) and Stata software (version 12.0) to build forest plots, along with a Deeks funnel plot and a bivariate boxplot for analysis. Result Overall, the sensitivity, specificity, and diagnostic odds ratio were 0.79, 0.97, and 328.18, respectively. The sensitivity for the subgroup with RNA extraction appeared to be higher, at 0.88 (0.86–0.90), compared to the subgroup without RNA extraction, at 0.50 (0.45–0.55), with no significant difference in specificity. Conclusion RT-LAMP assay exhibited high specificity regarding current SARS-CoV-2 infection. However, its overall sensitivity was relatively moderate. Extracting RNA was found to be beneficial in improving sensitivity.

Publisher

Oxford University Press (OUP)

Subject

Biochemistry (medical),Clinical Biochemistry

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