Evaluating de novo sequencing in proteomics: already an accurate alternative to database-driven peptide identification?
Author:
Affiliation:
1. Research Group Bioinformatics, Robert Koch Institute, Berlin, Germany
Funder
Deutsche Forschungsgemeinschaft
Publisher
Oxford University Press (OUP)
Subject
Molecular Biology,Information Systems
Link
http://academic.oup.com/bib/article-pdf/19/5/954/25861082/bbx033.pdf
Reference99 articles.
1. Optimization and testing of mass spectral library search algorithms for compound identification;Stein;J Am Soc Mass Spectrom,1994
2. Identifying proteins from two-dimensional gels by molecular mass searching of peptide fragments in protein sequence databases;Henzel;Proc Natl Acad Sci USA,1993
3. An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database;Eng;J Am Soc Mass Spectrom,1994
4. Probability-based protein identification by searching sequence databases using mass spectrometry data;Perkins;Electrophoresis,1999
5. Current methods for global proteome identification;Vaudel;Expert Rev Proteomics,2012
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