Deep learning for biological age estimation

Author:

Ashiqur Rahman Syed1,Giacobbi Peter2,Pyles Lee3,Mullett Charles3,Doretto Gianfranco1,Adjeroh Donald A1

Affiliation:

1. Department of Computer Science & Electrical Engineering, West Virginia University, Morgantown, 26506, USA

2. School of Public Health, Social and Behavioral Science, West Virginia University, Morgantown, 26506, USA

3. Department of Pediatrics, West Virginia University, Morgantown, 26506, USA

Abstract

Abstract Modern machine learning techniques (such as deep learning) offer immense opportunities in the field of human biological aging research. Aging is a complex process, experienced by all living organisms. While traditional machine learning and data mining approaches are still popular in aging research, they typically need feature engineering or feature extraction for robust performance. Explicit feature engineering represents a major challenge, as it requires significant domain knowledge. The latest advances in deep learning provide a paradigm shift in eliciting meaningful knowledge from complex data without performing explicit feature engineering. In this article, we review the recent literature on applying deep learning in biological age estimation. We consider the current data modalities that have been used to study aging and the deep learning architectures that have been applied. We identify four broad classes of measures to quantify the performance of algorithms for biological age estimation and based on these evaluate the current approaches. The paper concludes with a brief discussion on possible future directions in biological aging research using deep learning. This study has significant potentials for improving our understanding of the health status of individuals, for instance, based on their physical activities, blood samples and body shapes. Thus, the results of the study could have implications in different health care settings, from palliative care to public health.

Funder

National Science Foundation

National Institutes of Health

Publisher

Oxford University Press (OUP)

Subject

Molecular Biology,Information Systems

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