Serotypes of Streptococcus pneumoniae in Children Aged <5 Years Hospitalized With or Without Pneumonia in Developing and Emerging Countries: A Descriptive, Multicenter Study

Author:

Dananché Cédric12ORCID,Paranhos-Baccalà Gláucia1,Messaoudi Mélina1,Sylla Mariam3,Awasthi Shally4,Bavdekar Ashish5,Sanghavi Sonali5,Diallo Souleymane3,Pape Jean-William6,Rouzier Vanessa6,Chou Monidarin7,Eap Tekchheng7,Rakoto-Andrianarivelo Mala8,Maeder Muriel8,Wang Jianwei9,Ren Lili9,Dash-Yandag Budragchaagiin10,Nymadawa Pagbajabyn10,Guillen Rosa11,Russomando Graciela11,Endtz Hubert1,Komurian-Pradel Florence1,Vanhems Philippe12,Sánchez Picot Valentina1,

Affiliation:

1. Emerging Pathogens Laboratory, Fondation Mérieux, Centre International de Recherche en Infectiologie, Institut National de la Santé et de la Recherche Médicale (INSERM) U1111, Centre National de la Recherche Scientifique (CNRS) Unité Mixte de Recherche (UMR)5308, École Nationale Supérieure (ENS) de Lyon, Université Claude Bernard Lyon, France

2. Infection Control and Epidemiology Department, Hospices Civils de Lyon, France

3. Gabriel Touré Hospital, Bamako, Mali

4. Chatrapati Shahu Ji Maharaj Medical University, Lucknow, India

5. KEM Hospital Research Center, Pune, India

6. Centres Groupe Haïtien d'Etude du Sarcome de Kaposi et des Infections Opportunistes, Port-au-Prince, Haiti

7. Faculty of Pharmacy, University of Health Sciences, Phnom Penh, Cambodia

8. Fondation Mérieux, Centre d'Infectiologie Charles Mérieux, Antananarivo, Madagascar

9. Ministry of Health Key Laboratory of the Systems Biology of Pathogens and Dr. Christophe Mérieux Laboratory, Fondation Mérieux, Institute of Pathogen Biology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China

10. Mongolian Academy of Medical Sciences, Ulaanbaatar

11. Research Institute of Health, Asuncion, Paraguay

Abstract

Abstract Background Improving knowledge regarding Streptococcus pneumoniae distribution in pneumonia cases is important to better target preventive and curative measures. The objective was to describe S. pneumoniae serotypes in children with or without pneumonia Methods It was a case-control study carried out in 8 developing and emerging countries between 2010 and 2014. Cases were children aged <5 years admitted to the hospital for pneumonia. Controls were children admitted for surgery or routine outpatient care. Results In nasopharyngeal samples, S. pneumoniae were detected in 68.2% of the cases and 47.5% of the controls (P < .001). Nasopharyngeal carriage was associated with a higher risk of being a case in 6/8 study sites (adjusted odds ratio ranged from 0.71 [95% confidence interval [CI], .39–1.29; P = .26] in India [Pune/Vadu] to 11.86 [95% CI, 5.77–24.41; P < .001] in Mongolia). The 13-valent pneumococcal conjugate vaccine (PCV13) serotypes were more frequently detected in cases with nasopharyngeal carriage (67.1%) than in controls with nasopharyngeal carriage (54.6%), P < .001. Streptococcus pneumoniae was detected in blood by polymerase chain reaction in 8.3% of the cases. Of 34 cases with an S. pneumoniae serotype detected in blood, 27 (79%) had the same serotype in the nasopharyngeal sample. Conclusions The results confirm the assumption that the isolate carrying or causing disease in an individual is of the same serotype. Most serotypes independently associated with nasopharyngeal carriage or pneumonia are covered by PCV13, suggesting that increased PCV coverage would reduce the burden of S. pneumoniae–related pneumonia.

Funder

(GABRIEL) Network of Fondation Mérieux

Publisher

Oxford University Press (OUP)

Subject

Infectious Diseases,Microbiology (medical)

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