Deep learning for cardiovascular medicine: a practical primer

Author:

Krittanawong Chayakrit12,Johnson Kipp W3,Rosenson Robert S2,Wang Zhen45,Aydar Mehmet6,Baber Usman2,Min James K7,Tang W H Wilson8910,Halperin Jonathan L2,Narayan Sanjiv M11

Affiliation:

1. Department of Internal Medicine, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Pl, New York, NY, USA

2. Department of Cardiovascular Diseases, Icahn School of Medicine at Mount Sinai, Mount Sinai Hospital, Mount Sinai Heart, New York, NY, USA

3. Department of Genetics and Genomic Sciences, Institute for Next Generation Healthcare, Icahn School of Medicine at Mount Sinai, New York, NY, USA

4. Robert D. and Patricia E. Kern Center for the Science of Health Care Delivery, Mayo Clinic, Rochester, MN, USA

5. Division of Health Care Policy and Research, Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA

6. Department of Computer Science, Kent State University, Kent, OH, USA

7. Department of Radiology, New York-Presbyterian Hospital and Weill Cornell Medicine, New York, NY, USA

8. Department of Cardiovascular Medicine, Heart and Vascular Institute, Cleveland Clinic, OH, USA

9. Department of Cellular and Molecular Medicine, Lerner Research Institute, Cleveland, OH, USA

10. Center for Clinical Genomics, Cleveland Clinic, Cleveland, OH, USA

11. Cardiovascular Institute and Department of Cardiovascular Medicine, Stanford University Medical Center, Stanford, CA, USA

Abstract

AbstractDeep learning (DL) is a branch of machine learning (ML) showing increasing promise in medicine, to assist in data classification, novel disease phenotyping and complex decision making. Deep learning is a form of ML typically implemented via multi-layered neural networks. Deep learning has accelerated by recent advances in computer hardware and algorithms and is increasingly applied in e-commerce, finance, and voice and image recognition to learn and classify complex datasets. The current medical literature shows both strengths and limitations of DL. Strengths of DL include its ability to automate medical image interpretation, enhance clinical decision-making, identify novel phenotypes, and select better treatment pathways in complex diseases. Deep learning may be well-suited to cardiovascular medicine in which haemodynamic and electrophysiological indices are increasingly captured on a continuous basis by wearable devices as well as image segmentation in cardiac imaging. However, DL also has significant weaknesses including difficulties in interpreting its models (the ‘black-box’ criticism), its need for extensive adjudicated (‘labelled’) data in training, lack of standardization in design, lack of data-efficiency in training, limited applicability to clinical trials, and other factors. Thus, the optimal clinical application of DL requires careful formulation of solvable problems, selection of most appropriate DL algorithms and data, and balanced interpretation of results. This review synthesizes the current state of DL for cardiovascular clinicians and investigators, and provides technical context to appreciate the promise, pitfalls, near-term challenges, and opportunities for this exciting new area.

Funder

National Institutes of Health

Stanford University

University of California Regents

Publisher

Oxford University Press (OUP)

Subject

Cardiology and Cardiovascular Medicine

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