The genetic landscape of autosomal dominant polycystic kidney disease in Kuwait

Author:

Ali Hamad12ORCID,Naim Medhat3,Senum Sarah R4,AlSahow Ali5ORCID,Bahbahani Yousif36,Abu-Farha Mohamed7,Abubaker Jehad7,Mohammad Anwar7,Al-Hunayan Adel8,Asbeutah Akram M9,Zayed Mohamed10,Devarajan Sriraman11,Hussain Naser3,John Sumi Elsa2,Channanath Arshad2,Thanaraj Thangavel Alphonse2,Al-Ali Mohammad12,AlMousawi Mustafa13,Al-Mulla Fahd2,Harris Peter C4

Affiliation:

1. Department of Medical Laboratory Sciences, Faculty of Allied Health Sciences, Health Sciences Center, Kuwait University , Jabriya , Kuwait

2. Department of Genetics and Bioinformatics, Dasman Diabetes Institute , Dasman , Kuwait

3. Division of Nephrology, Mubarak Al-Kabeer Hospital, Ministry of Health , Jabriya , Kuwait

4. Division of Nephrology and Hypertension, Mayo Clinic , Rochester, MN , USA

5. Division of Nephrology, Al-Jahra Hospital, Ministry of Health , Al-Jahra , Kuwait

6. Medical Division, Dasman Diabetes Institute , Dasman , Kuwait

7. Department of Biochemistry and Molecular Biology, Dasman Diabetes Institute , Dasman , Kuwait

8. Department of Surgery, Faculty of Medicine, Health Sciences Center, Kuwait University , Jabriya , Kuwait

9. Department of Radiological Sciences, Faculty of Allied Health Sciences, Health Sciences Center, Kuwait University , Jabriya , Kuwait

10. Department of Radiology, Mubarak Al-Kabeer Hospital, Ministry of Health , Jabriya , Kuwait

11. National Dasman Diabetes Biobank, Dasman Diabetes Institute , Dasman , Kuwait

12. Next Generation Sequencing Laboratory, Kuwait Medical Genetics Center, Ministry of Health , Sulaibikhat , Kuwait

13. Department of Transplantation, Hamed Al Essa Organ Transplant Centre , Ministry of Health, Kuwait City , Kuwait

Abstract

ABSTRACT Background Autosomal dominant polycystic kidney disease (ADPKD) is the most common renal monogenic disease, characterized by bilateral accumulation of renal fluid-filled cysts leading to progressive renal volume enlargement and gradual impairment of kidney function, often resulting in end-stage renal disease. Kuwait could provide valuable genetic insights about ADPKD, including intrafamilial phenotypic variation, given its large household size. This study aims to provide a comprehensive description of the pathogenic variants linked to ADPKD in the Kuwaiti population using multiple genetic analysis modalities and to describe and analyse the ADPKD phenotypic spectrum in terms of kidney function, kidney volume and renal survival. Methods A total of 126 ADPKD patients from 11 multiplex families and 25 singletons were recruited into the study. A combination of targeted next-generation sequencing (tNGS), long-range polymerase chain reaction, Sanger sequencing and multiplex ligation-dependent probe amplification were utilized for genetic diagnosis. Clinical evaluation was conducted through renal function testing and ultrasonographic kidney volume analysis. Results We identified 29 ADPKD pathogenic mutations from 36 families achieving an overall molecular genetic diagnostic rate of 112/126 (88.9%), including 29/36 (80.6%) in families. A total of 28/36 (77.8%) families had pathogenic mutations in PKD1, of which 17/28 (60.7%) were truncating, and 1/36 (2.8%) had a pathogenic variant in the IFT140 gene. A total of 20/29 (69%) of the identified ADPKD mutations were novel and described for the first time, including a TSC2-PKD1 contiguous syndrome. Clinical analysis indicated that genetically unresolved ADPKD cases had no apparent association between kidney volume and age. Conclusion We describe for the first time the genetic landscape of ADPKD in Kuwait. The observed genetic heterogeneity underlining ADPKD along with the wide phenotypic spectrum reveal the level of complexity in disease pathophysiology. ADPKD genetic testing could improve the care of patients through improved disease prognostication, guided treatment and genetic counselling. However, to fulfil the potential of genetic testing, it is important to overcome the hurdle of genetically unresolved ADPKD cases.

Funder

KFAS

National Institute of Diabetes and Digestive and Kidney Diseases

Publisher

Oxford University Press (OUP)

Subject

Transplantation,Nephrology

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