In vitro reconstitution of the Escherichia coli 70S ribosome with a full set of recombinant ribosomal proteins

Author:

Aoyama Ryo12,Masuda Keiko1,Shimojo Masaru12,Kanamori Takashi3,Ueda Takuya24,Shimizu Yoshihiro1

Affiliation:

1. Laboratory for Cell-Free Protein Synthesis, RIKEN Center for Biosystems Dynamics Research, Suita, Osaka 565-0874, Japan

2. Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba 277-8562, Japan

3. GeneFrontier Corporation, Kashiwa, Chiba 277-0005, Japan

4. Department of Integrative Bioscience and Biomedical Engineering, Graduate School of Science and Engineering, Waseda University, Shinjuku, Tokyo 162-8480, Japan

Abstract

Abstract Many studies of the reconstitution of the Escherichia coli small ribosomal subunit from its individual molecular parts have been reported, but contrastingly, similar studies of the large ribosomal subunit have not been well performed to date. Here, we describe protocols for preparing the 33 ribosomal proteins of the E. coli 50S subunit and demonstrate successful reconstitution of a functionally active 50S particle that can perform protein synthesis in vitro. We also successfully reconstituted both ribosomal subunits (30S and 50S) and 70S ribosomes using a full set of recombinant ribosomal proteins by integrating our developed method with the previously developed fully recombinant-based integrated synthesis, assembly and translation. The approach described here makes a major contribution to the field of ribosome engineering and could be fundamental to the future studies of ribosome assembly processes.

Funder

RIKEN Center for Biosystems Dynamics Research

Japan Science and Technology Agency

CREST Program

Astrobiology Center Project of the National Institutes of Natural Sciences

Human Frontier Science Program

Japan Society for the Promotion of Science

Publisher

Oxford University Press (OUP)

Subject

Molecular Biology,Biochemistry,General Medicine

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