PERFUMES: pipeline to extract RNA functional motifs and exposed structures
Author:
Affiliation:
1. School of Computer Science, McGill University , Montréal, QC H3A 0E9, Canada
2. Institut de Recherches Cliniques de Montréal (IRCM) , Montréal, QC H2W 1R7, Canada
Abstract
Funder
IVADO
FRQNT
Publisher
Oxford University Press (OUP)
Link
https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae056/56486805/btae056.pdf
Reference20 articles.
1. Structure and function of the T-loop structural motif in noncoding RNAs;Chan;Wiley Interdiscip Rev RNA,2013
2. Targeting RNA structures with small molecules;Childs-Disney;Nat Rev Drug Discov,2022
3. RNA Bricks—a database of RNA 3D motifs and their interactions;Chojnowski;Nucleic Acids Res,2013
4. Varna: interactive drawing and editing of the RNA secondary structure;Darty;Bioinformatics,2009
5. Structure of TAR RNA complexed with a Tat-TAR interaction nanomolar inhibitor that was identified by computational screening;Du;Chem Biol,2002
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