Sequence progressive alignment, a framework for practical large-scale probabilistic consistency alignment-Reference-Cited by-同舟云学术

Sequence progressive alignment, a framework for practical large-scale probabilistic consistency alignment

Published:2008-12-04 Issue:3 Volume:25 Page:295-301
ISSN:1460-2059
Container-title:Bioinformatics
language:en
Short-container-title:

Author:

Paten Benedict,Herrero Javier,Beal Kathryn,Birney Ewan

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Link

http://academic.oup.com/bioinformatics/article-pdf/25/3/295/16890851/btn630.pdf

Reference28 articles.

1. An equality and associated maximisation technique in statistical estimation for probabilistic functions of Markov processes;Baum;Inequalities,1972

2. Aligning multiple genomic sequences with the threaded blockset aligner;Blanchette;Genome Res.,2004

3. Transducers: an emerging probabilistic framework for modeling indels on trees;Bradley;Bioinformatics,2007

4. MAVID: constrained ancestral alignment of multiple sequences;Bray;Genome Res.,2004

5. LAGAN and Multi-LAGAN: efficient tools for large-scale multiple alignment of genomic DNA;Brudno;Genome Res.,2003

Cited by 42 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Synergy of Human Language Processing and Artificial Intelligence;2024 International Conference on Advances in Modern Age Technologies for Health and Engineering Science (AMATHE);2024-05-16

2. Multiple genome alignment in the telomere-to-telomere assembly era;Genome Biology;2022-08-29

3. DLPAlign: A Deep Learning based Progressive Alignment Method for Multiple Protein Sequences;CSBio '20: Proceedings of the Eleventh International Conference on Computational Systems-Biology and Bioinformatics;2020-11-19

4. Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes;Nature Biotechnology;2020-05-04

5. Incremental Calculation Framework for Complex Data;Advances in Data Science;2020-01-15