1. MIPSTR: a method for multiplex genotyping of germline and somatic STR variation across many individuals;Carlson;Genome Res,2015
2. Stacks: building and genotyping loci de novo from short-read sequences;Catchen;G3,2011
3. SpeedSeq: ultra-fast personal genome analysis and interpretation;Chiang;Nat. Meth,2015
4. A framework for variation discovery and genotyping using next-generation DNA sequencing data;DePristo;Nat. Genet,2011
5. Assemblathon 1: a competitive assessment of de novo short read assembly methods;Earl;Genome Res,2011