CD-HIT Suite: a web server for clustering and comparing biological sequences

Author:

Huang Ying1,Niu Beifang1,Gao Ying1,Fu Limin1,Li Weizhong1

Affiliation:

1. California Institute for Telecommunications and Information Technology, University of California San Diego, La Jolla, CA, USA

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Reference9 articles.

1. SMART 6: recent updates and new developments;Letunic;Nucleic Acids Res.,2009

2. Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences;Li;Bioinformatics,2006

3. Clustering of highly homologous sequences to reduce the size of large protein databases;Li;Bioinformatics,2001

4. Tolerating some redundancy significantly speeds up clustering of large protein databases;Li;Bioinformatics,2002

5. Probing metagenomics by rapid cluster analysis of very large datasets;Li;PLoS ONE,2008

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