Author:
Lindén Martin,Ćurić Vladimir,Boucharin Alexis,Fange David,Elf Johan
Abstract
Abstract
Summary: SMeagol is a software tool to simulate highly realistic microscopy data based on spatial systems biology models, in order to facilitate development, validation and optimization of advanced analysis methods for live cell single molecule microscopy data.
Availability and implementation: SMeagol runs on Matlab R2014 and later, and uses compiled binaries in C for reaction–diffusion simulations. Documentation, source code and binaries for Mac OS, Windows and Ubuntu Linux can be downloaded from http://smeagol.sourceforge.net.
Contact: johan.elf@icm.uu.se
Supplementary information: Supplementary data are available at Bioinformatics online.
Funder
European Research Council
Vetenskapsrådet, the Knut and Alice Wallenberg Foundation
Foundation for Strategic Research
Publisher
Oxford University Press (OUP)
Subject
Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability
Cited by
26 articles.
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