Ultrafast SNP analysis using the Burrows–Wheeler transform of short-read data-Reference-Cited by-同舟云学术

Ultrafast SNP analysis using the Burrows–Wheeler transform of short-read data

Published:2015-01-20 Issue:10 Volume:31 Page:1577-1583
ISSN:1460-2059
Container-title:Bioinformatics
language:en
Short-container-title:

Author:

Kimura Kouichi,Koike Asako

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Link

http://academic.oup.com/bioinformatics/article-pdf/31/10/1577/17085583/btv024.pdf

Reference16 articles.

1. Lightweight BWT construction for very large string collections;Bauer,2011

2. A block-sorting loss-less data compression algorithm;Burrows;SRC Res. Rep.,1994

3. Large-scale compression of genomic sequence databases with the Burrows-Wheeler transform;Cox;Bioinformatics,2012

4. A framework for variation discovery and genotyping using next-generation DNA sequencing data;DePristo;Nat. Genet.,2011

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