CoMutDB: the landscape of somatic mutation co-occurrence in cancers

Author:

Jiang Limin1ORCID,Yu Hui1,Tang Jijun2,Guo Yan1ORCID

Affiliation:

1. Department of Internal Medicine, Comprehensive Cancer Center, University of New Mexico , Albuquerque, NM 87109, USA

2. Department of Computer Science, University of South Carolina , Columbia, SC, 29201, USA

Abstract

Abstract Motivation Somatic mutation co-occurrence has been proven to have a profound effect on tumorigenesis. While some studies have been conducted on co-mutations, a centralized resource dedicated to co-mutations in cancer is still lacking. Results Using multi-omics data from over 30 000 subjects and 1747 cancer cell lines, we present the Cancer co-mutation database (CoMutDB), the most comprehensive resource devoted to describing cancer co-mutations and their characteristics. Availability and implementation The data underlying this article are available in the online database CoMutDB: http://www.innovebioinfo.com/Database/CoMutDB/Home.php.

Funder

Cancer Center Support

National Cancer Institute

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

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