An automated benchmarking platform for MHC class II binding prediction methods

Author:

Andreatta Massimo1ORCID,Trolle Thomas2,Yan Zhen3,Greenbaum Jason A3,Peters Bjoern4,Nielsen Morten15ORCID

Affiliation:

1. Instituto de Investigaciones Biotecnológicas, Universidad Nacional de San Martín, San Martín, Buenos Aires, Argentina

2. Evaxion Biotech, Copenhagen N, Denmark

3. Bioinformatics Core Facility, La Jolla Institute for Allergy and Immunology, La Jolla, CA, USA

4. Division of Vaccine Discovery, La Jolla Institute for Allergy and Immunology, La Jolla, CA, USA

5. Department of Bio and Health Informatics, Technical University of Denmark, Lyngby, Denmark

Funder

National Institutes of Health

CONICET

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Reference24 articles.

1. Accurate pan-specific prediction of peptide-MHC class II binding affinity with improved binding core identification;Andreatta;Immunogenetics,2015

2. Pathways of antigen processing;Blum;Annu. Rev. Immunol,2013

3. Automated generation and evaluation of specific MHC binding predictive tools: ARB matrix applications;Bui;Immunogenetics,2005

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