chimeraviz: a tool for visualizing chimeric RNA-Reference-Cited by-同舟云学术

chimeraviz: a tool for visualizing chimeric RNA

Published:2017-05-19 Issue:18 Volume:33 Page:2954-2956
ISSN:1367-4803
Container-title:Bioinformatics
language:en
Short-container-title:

Author:

Lågstad Stian¹²³,Zhao Sen¹³,Hoff Andreas M¹³,Johannessen Bjarne¹³,Lingjærde Ole Christian²³,Skotheim Rolf I¹²³

Affiliation:

1. Department of Molecular Oncology, Institute for Cancer Research, The Norwegian Radium Hospital, Oslo University Hospital, Oslo, Norway

2. Department of Informatics, Faculty of Mathematics and Natural Sciences, University of Oslo, Oslo, Norway

3. Centre for Cancer Biomedicine, Faculty of Medicine, University of Oslo, Oslo, Norway

Funder

Norwegian Cancer Society

Research Council of Norway

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Link

http://academic.oup.com/bioinformatics/article-pdf/33/18/2954/25164079/btx329.pdf

Reference14 articles.

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2. JAFFA: high sensitivity transcriptome-focused fusion gene detection;Davidson;Genome Med,2015

3. Chimeras taking shape: potential functions of proteins encoded by chimeric RNA transcripts;Frenkel-Morgenstern;Genome Res,2012

4. FusionMap: detecting fusion genes from next-generation sequencing data at base-pair resolution;Ge;Bioinformatics,2011

5. Bioconductor: open software development for computational biology and bioinformatics;Gentleman;Genome Biol,2004

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