STACAS: Sub-Type Anchor Correction for Alignment in Seurat to integrate single-cell RNA-seq data
Author:
Affiliation:
1. Ludwig Institute for Cancer Research Lausanne, University of Lausanne, CH-1066 Epalinges, Switzerland
2. Department of Oncology, CHUV, UNIL CHUV, CH-1066 Epalinges, Lausanne, Switzerland
3. University of Lausanne, Lausanne, Switzerland
Abstract
Funder
Swiss National Science Foundation
Publisher
Oxford University Press (OUP)
Subject
Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability
Link
http://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaa755/34051610/btaa755.pdf
Reference11 articles.
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3. Single-cell RNA-seq analysis software providers scramble to offer solutions;Eisenstein;Nat. Biotechnol,2020
4. Batch effects in single-cell RNA-sequencing data are corrected by matching mutual nearest neighbors;Haghverdi;Nat. Biotechnol,2018
5. Eleven grand challenges in single-cell data science;Lähnemann;Genome Biol,2020
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