Novo&Stitch: accurate reconciliation of genome assemblies via optical maps-Reference-Cited by-同舟云学术

Novo&Stitch: accurate reconciliation of genome assemblies via optical maps

Published:2018-06-27 Issue:13 Volume:34 Page:i43-i51
ISSN:1367-4803
Container-title:Bioinformatics
language:en
Short-container-title:

Author:

Pan Weihua¹,Wanamaker Steve I²,Ah-Fong Audrey M V³,Judelson Howard S³,Lonardi Stefano¹

Affiliation:

1. Department of Computer Science and Engineering, UC Riverside, CA, USA

2. Department of Botany and Plant Sciences, UC Riverside, CA, USA

3. Department of Plant Pathology and Microbiology, UC Riverside, CA, USA

Funder

National Science Foundation

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Link

http://academic.oup.com/bioinformatics/article-pdf/34/13/i43/25098038/bty255.pdf

Reference35 articles.

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2. Genome structure of a Saccharomyces cerevisiae strain widely used in bioethanol production;Argueso;Genome Res,2009

3. Assembling large genomes with single-molecule sequencing and locality-sensitive hashing;Berlin;Nat. Biotechnol,2015

4. Single-molecule sequencing and chromatin conformation capture enable de novo reference assembly of the domestic goat genome;Bickhart;Nat. Genet,2017

5. Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species;Bradnam;Gigascience,2013

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