Approximating facial expression effects on diagnostic accuracy via generative AI in medical genetics

Author:

Patel Tanviben1,Othman Amna A1,Sümer Ömer2,Hellman Fabio2,Krawitz Peter3ORCID,André Elisabeth2,Ripper Molly E1,Fortney Chris4,Persky Susan4ORCID,Hu Ping1,Tekendo-Ngongang Cedrik1,Hanchard Suzanna Ledgister1,Flaharty Kendall A1,Waikel Rebekah L1,Duong Dat1,Solomon Benjamin D1

Affiliation:

1. Medical Genomics Unit, Medical Genetics Branch, National Human Genome Research Institute , Bethesda, MA 20892, United States

2. Institute of Computer Science, Augsburg University , Augsburg, Bavaria 86159, Germany

3. Institute for Genomic Statistics and Bioinformatics, University of Bonn , Bonn, North Rhine-Westphalia 53113, Germany

4. Social and Behavioral Research Branch, National Human Genome Research Institute , Bethesda, MA 20892, United States

Abstract

Abstract Summary Artificial intelligence (AI) is increasingly used in genomics research and practice, and generative AI has garnered significant recent attention. In clinical applications of generative AI, aspects of the underlying datasets can impact results, and confounders should be studied and mitigated. One example involves the facial expressions of people with genetic conditions. Stereotypically, Williams (WS) and Angelman (AS) syndromes are associated with a “happy” demeanor, including a smiling expression. Clinical geneticists may be more likely to identify these conditions in images of smiling individuals. To study the impact of facial expression, we analyzed publicly available facial images of approximately 3500 individuals with genetic conditions. Using a deep learning (DL) image classifier, we found that WS and AS images with non-smiling expressions had significantly lower prediction probabilities for the correct syndrome labels than those with smiling expressions. This was not seen for 22q11.2 deletion and Noonan syndromes, which are not associated with a smiling expression. To further explore the effect of facial expressions, we computationally altered the facial expressions for these images. We trained HyperStyle, a GAN-inversion technique compatible with StyleGAN2, to determine the vector representations of our images. Then, following the concept of InterfaceGAN, we edited these vectors to recreate the original images in a phenotypically accurate way but with a different facial expression. Through online surveys and an eye-tracking experiment, we examined how altered facial expressions affect the performance of human experts. We overall found that facial expression is associated with diagnostic accuracy variably in different genetic conditions.

Funder

Intramural Research Program

National Human Genome Research Institute

National Institutes of Health

Publisher

Oxford University Press (OUP)

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