PhyloWGA: chromosome-aware phylogenetic interrogation of whole genome alignments
Author:
Affiliation:
1. Department of Computer and Electrical Engineering and Computer Science, Florida Atlantic University, Boca Raton, FL 33431, USA
2. Department of Biology, University of Texas at Arlington, Arlington, TX 76019, USA
Abstract
Funder
National Science Foundation
National Institutes of Health
Publisher
Oxford University Press (OUP)
Subject
Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability
Link
http://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaa884/34883651/btaa884.pdf
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2. Statistical binning leads to profound model violation due to gene tree error incurred by trying to avoid gene tree error;Adams;Mol. Phylogenet. Evol,2019
3. Weighted statistical binning: enabling statistically consistent genome-scale phylogenetic analyses;Bayzid;PLoS One,2015
4. Geometry of the space of phylogenetic trees;Billera;Adv. Appl. Math,2001
5. Genome-scale coestimation of species and gene trees;Boussau;Genome Res,2013
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1. Likelihood-Based Tests of Species Tree Hypotheses;Molecular Biology and Evolution;2023-07
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