TriPoly: haplotype estimation for polyploids using sequencing data of related individuals-Reference-Cited by-同舟云学术

TriPoly: haplotype estimation for polyploids using sequencing data of related individuals

Published:2018-06-01 Issue: Volume: Page:
ISSN:1367-4803
Container-title:Bioinformatics
language:en
Short-container-title:

Author:

Motazedi Ehsan¹²^ORCID,de Ridder Dick¹,Finkers Richard²^ORCID,Baldwin Samantha³,Thomson Susan³,Monaghan Katrina³,Maliepaard Chris²

Affiliation:

1. Bioinformatics Group, Wageningen University and Research, Postbus 633, 6700 AP, Wageningen, The Netherlands

2. Wageningen UR Plant Breeding, Postbus 386, 6700 AJ, Wageningen, The Netherlands

3. New Zealand Institute for Plant and Food Research, Private Bag, 4704, Christchurch, New Zealand

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Link

http://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/bty442/25109790/bty442.pdf

Reference31 articles.

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2. Haplotype assembly in polyploid genomes and identical by descent shared tracts;Aguiar;Bioinformatics,2013

3. HapCUT: an efficient and accurate algorithm for the haplotype assembly problem;Bansal;Bioinformatics,2008

4. HapTree: a novel Bayesian framework for single individual polyplotyping using NGS data;Berger;PLoS Comput. Biol,2014

5. The double-reduction landscape in tetraploid potato as revealed by a high-density linkage map;Bourke;Genetics,2015

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