STAR: ultrafast universal RNA-seq aligner-Reference-Cited by-同舟云学术

STAR: ultrafast universal RNA-seq aligner

Published:2012-10-25 Issue:1 Volume:29 Page:15-21
ISSN:1460-2059
Container-title:Bioinformatics
language:en
Short-container-title:

Author:

Dobin Alexander,Davis Carrie A.,Schlesinger Felix,Drenkow Jorg,Zaleski Chris,Jha Sonali,Batut Philippe,Chaisson Mark,Gingeras Thomas R.

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Link

http://academic.oup.com/bioinformatics/article-pdf/29/1/15/17101697/bts635.pdf

Reference22 articles.

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2. Mauve: multiple alignment of conserved genomic sequence with rearrangements;Darling;Genome Res.,2004

3. progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement;Darling;PLoS One,2010

4. Optimal spliced alignments of short sequence reads;De Bona;Bioinformatics,2008

5. Alignment of whole genomes;Delcher;Nucleic Acids Res.,1999

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