GapRepairer: a server to model a structural gap and validate it using topological analysis-Reference-Cited by-同舟云学术

GapRepairer: a server to model a structural gap and validate it using topological analysis

Published:2018-04-30 Issue:19 Volume:34 Page:3300-3307
ISSN:1367-4803
Container-title:Bioinformatics
language:en
Short-container-title:

Author:

Jarmolinska Aleksandra I¹²,Kadlof Michal¹³,Dabrowski-Tumanski Pawel¹⁴,Sulkowska Joanna I¹⁴

Affiliation:

1. Centre of New Technologies, University of Warsaw, Warsaw, Poland

2. College of Inter-Faculty Individual Studies in Mathematics and Natural Sciences, Warsaw, Poland

3. Faculty of Physics, University of Warsaw, Warsaw, Poland

4. Faculty of Chemistry, University of Warsaw, Warsaw, Poland

Funder

National Science Centre

Polish Ministry of Science and Higher Education

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Link

http://academic.oup.com/bioinformatics/article-pdf/34/19/3300/25839496/bty334.pdf

Reference33 articles.

1. Announcing the worldwide protein data bank;Berman;Nat. Struct. Mol. Biol,2003

2. Methyl transfer by substrate signaling from a knotted protein fold;Christian;Nat. Struct. Mol. Biol,2016

3. Linkprot: a database collecting information about biological links;Dabrowski-Tumanski;Nucleic Acids Res,2017

4. Lassoprot: server to analyze biopolymers with lassos;Dabrowski-Tumanski;Nucleic Acids Res,2016

5. In search of functional advantages of knots in proteins;Dabrowski-Tumanski;PLoS One,2016

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