info-gibbs: a motif discovery algorithm that directly optimizes information content during sampling

Author:

Defrance Matthieu,van Helden Jacques

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Reference34 articles.

1. Fitting a mixture model by expectation maximization to discover motifs in biopolymers;Bailey;Proc. Inter. Conf. Intell. Syst. Mol. Biol.,1994

2. TFBS identification based on genetic algorithm with combined representations and adaptive post-processing;Chan;Bioinformatics,2008

3. WebLogo: a sequence logo generator;Crooks;Genome Res.,2004

4. RegulonDB (version 6.0): gene regulation model of Escherichia coli k-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation;Gama-Castro;Nucleic Acids Res.,2008

5. Transcriptional regulatory code of a eukaryotic genome;Harbison;Nature,2004

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