Trainable Weka Segmentation: a machine learning tool for microscopy pixel classification

Author:

Arganda-Carreras Ignacio123,Kaynig Verena4,Rueden Curtis5,Eliceiri Kevin W5,Schindelin Johannes5,Cardona Albert6,Sebastian Seung H7

Affiliation:

1. Ikerbasque, Basque Foundation for Science, Bilbao, Spain

2. Computer Science and Artificial Intelligence Department, Basque Country University, San Sebastian, Spain

3. Donostia International Physics Center, San Sebastian, Spain

4. Harvard John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA

5. Laboratory for Optical and Computational Instrumentation, University of Wisconsin, Madison, WI, USA

6. Howard Hughes Medical Institute, Janelia Research Campus, Ashburn, VA, USA

7. Neuroscience Institute and Computer Science Department, Princeton University, NJ, USA

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Reference7 articles.

1. The weka data mining software: an update;Hall;ACM SIGKDD Explor. Newslett,2009

2. Improved structure, function and compatibility for cellprofiler: modular high-throughput image analysis software;Kamentsky;Bioinformatics,2011

3. Collaborative analysis of multi-gigapixel imaging data using cytomine;Marée;Bioinformatics,2016

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