Fixing molecular complexes in BioPAX standards to enrich interactions and detect redundancies using semantic web technologies
Author:
Affiliation:
1. Univ Rennes, Inria, CNRS, IRISA—UMR 6074 , F-35000 Rennes, France
2. PEGASE, INRAE, Institut Agro , F-35590 Saint Gilles, France
Abstract
Funder
French National Research Institute for Agriculture
Publisher
Oxford University Press (OUP)
Subject
Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability
Link
https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btad257/50094328/btad257.pdf
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3. The BioPAX community standard for pathway data sharing;Demir;Nat Biotechnol,2010
4. Using biological pathway data with paxtools;Demir;PLoS Comput Biol,2013
5. Extracting reaction networks from databases-opening Pandora’s box;Fearnley;Brief Bioinform,2014
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