Post-translational modification of RNA m6A demethylase ALKBH5 regulates ROS-induced DNA damage response

Author:

Yu Fang12,Wei Jiangbo34ORCID,Cui Xiaolong34,Yu Chunjie1,Ni Wei5,Bungert Jörg2ORCID,Wu Lizi5ORCID,He Chuan34,Qian Zhijian12ORCID

Affiliation:

1. Department of Medicine, UF Health Cancer Center, University of Florida, Gainesville, FL 32610, USA

2. Department of Biochemistry and Molecular Biology, University of Florida, Gainesville, FL 32610, USA

3. Department of Chemistry, Department of Biochemistry and Molecular Biology, and Institute for Biophysical Dynamics, The University of Chicago, 929 East 57th Street, Chicago, IL 60637, USA

4. Howard Hughes Medical Institute, The University of Chicago, 929 East 57th Street, Chicago, IL 60637, USA

5. Department of Molecular Genetics and Microbiology, UF Genetic Institute, University of Florida, FL 32610, USA

Abstract

Abstract Faithful genome integrity maintenance plays an essential role in cell survival. Here, we identify the RNA demethylase ALKBH5 as a key regulator that protects cells from DNA damage and apoptosis during reactive oxygen species (ROS)-induced stress. We find that ROS significantly induces global mRNA N6-methyladenosine (m6A) levels by modulating ALKBH5 post-translational modifications (PTMs), leading to the rapid and efficient induction of thousands of genes involved in a variety of biological processes including DNA damage repair. Mechanistically, ROS promotes ALKBH5 SUMOylation through activating ERK/JNK signaling, leading to inhibition of ALKBH5 m6A demethylase activity by blocking substrate accessibility. Moreover, ERK/JNK/ALKBH5-PTMs/m6A axis is activated by ROS in hematopoietic stem/progenitor cells (HSPCs) in vivo in mice, suggesting a physiological role of this molecular pathway in the maintenance of genome stability in HSPCs. Together, our study uncovers a molecular mechanism involving ALKBH5 PTMs and increased mRNA m6A levels that protect genomic integrity of cells in response to ROS.

Funder

Leukemia and Lymphoma Society

Howard Hughes Medical Institute

UF startup

Publisher

Oxford University Press (OUP)

Subject

Genetics

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