SIRT3 consolidates heterochromatin and counteracts senescence

Author:

Diao Zhiqing12,Ji Qianzhao23,Wu Zeming1345,Zhang Weiqi2467,Cai Yusheng345,Wang Zehua12,Hu Jianli267,Liu Zunpeng12,Wang Qiaoran267,Bi Shijia12,Huang Daoyuan8,Ji Zhejun145,Liu Guang-Hui23458ORCID,Wang Si3458ORCID,Song Moshi2345ORCID,Qu Jing1245ORCID

Affiliation:

1. State Key Laboratory of Stem Cell and Reproductive Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China

2. University of Chinese Academy of Sciences, Beijing 100049, China

3. State Key Laboratory of Membrane Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China

4. Institute for Stem Cell and Regeneration, Chinese Academy of Sciences, Beijing 100101, China

5. Beijing Institute for Stem Cell and Regenerative Medicine, Beijing 100101, China

6. CAS Key Laboratory of Genomic and Precision Medicine, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China

7. China National Center for Bioinformation, Beijing 100101, China

8. Advanced Innovation Center for Human Brain Protection, National Clinical Research Center for Geriatric Disorders, Xuanwu Hospital Capital Medical University, Beijing 100053, China

Abstract

Abstract Sirtuin 3 (SIRT3) is an NAD+-dependent deacetylase linked to a broad range of physiological and pathological processes, including aging and aging-related diseases. However, the role of SIRT3 in regulating human stem cell homeostasis remains unclear. Here we found that SIRT3 expression was downregulated in senescent human mesenchymal stem cells (hMSCs). CRISPR/Cas9-mediated depletion of SIRT3 led to compromised nuclear integrity, loss of heterochromatin and accelerated senescence in hMSCs. Further analysis indicated that SIRT3 interacted with nuclear envelope proteins and heterochromatin-associated proteins. SIRT3 deficiency resulted in the detachment of genomic lamina-associated domains (LADs) from the nuclear lamina, increased chromatin accessibility and aberrant repetitive sequence transcription. The re-introduction of SIRT3 rescued the disorganized heterochromatin and the senescence phenotypes. Taken together, our study reveals a novel role for SIRT3 in stabilizing heterochromatin and counteracting hMSC senescence, providing new potential therapeutic targets to ameliorate aging-related diseases.

Funder

National Key Research and Development Program of China

Chinese Academy of Sciences

National Natural Science Foundation of China

Beijing Municipal Science and Technology Commission

Beijing Natural Science Foundation

K. C. Wong Education Foundation

Youth Innovation Promotion Association CAS

Chinese Academy of Medical Sciences

State Key Laboratory of Stem Cell and Reproductive Biology

State Key Laboratory of Membrane Biology

Publisher

Oxford University Press (OUP)

Subject

Genetics

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