The chromatin remodeler RSF1 coordinates epigenetic marks for transcriptional repression and DSB repair

Author:

Min Sunwoo12,Lee Ho-Soo12,Ji Jae-Hoon23,Heo Yungyeong4,Kim Yonghyeon4,Chae Sunyoung5,Choi Yong Won6,Kang Ho-Chul7ORCID,Nakanishi Makoto8,Cho Hyeseong12ORCID

Affiliation:

1. Department of Biochemistry, Ajou University School of Medicine, Suwon 16499, Korea

2. Genomic Instability Research Center, Ajou University School of Medicine, Suwon 16499, Korea

3. Department of Biochemistry and Structural Biology, The University of Texas Health San Antonio, TX 78229-3000, USA

4. Department of Biomedical Sciences, the Graduate School of Ajou University, Suwon, Korea

5. Institute of Medical Science, Ajou University School of Medicine, Suwon 16499, Korea

6. Department of Hematology-Oncology, Ajou University School of Medicine, Suwon, Korea

7. Department of Physiology, Ajou University School of Medicine, Suwon, Korea

8. Division of Cancer Cell Biology, The University of Tokyo, Tokyo 108-8639, Japan

Abstract

Abstract DNA lesions impact on local transcription and the damage-induced transcriptional repression facilitates efficient DNA repair. However, how chromatin dynamics cooperates with these two events remained largely unknown. We here show that histone H2A acetylation at K118 is enriched in transcriptionally active regions. Under DNA damage, the RSF1 chromatin remodeling factor recruits HDAC1 to DSB sites. The RSF1-HDAC1 complex induces the deacetylation of H2A(X)-K118 and its deacetylation is indispensable for the ubiquitination of histone H2A at K119. Accordingly, the acetylation mimetic H2A-K118Q suppressed the H2A-K119ub level, perturbing the transcriptional repression at DNA lesions. Intriguingly, deacetylation of H2AX at K118 also licenses the propagation of γH2AX and recruitment of MDC1. Consequently, the H2AX-K118Q limits DNA repair. Together, the RSF1-HDAC1 complex controls the traffic of the DNA damage response and transcription simultaneously in transcriptionally active chromatins. The interplay between chromatin remodelers and histone modifiers highlights the importance of chromatin versatility in the maintenance of genome integrity.

Funder

National Research Foundation of Korea

Publisher

Oxford University Press (OUP)

Subject

Genetics

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