SAbDab in the age of biotherapeutics: updates including SAbDab-nano, the nanobody structure tracker

Author:

Schneider Constantin1ORCID,Raybould Matthew I J1ORCID,Deane Charlotte M1ORCID

Affiliation:

1. Department of Statistics, University of Oxford, Oxford, UK

Abstract

Abstract In 2013, we released the Structural Antibody Database (SAbDab), a publicly available repository of experimentally determined antibody structures. In the interim, the rapid increase in the number of antibody structure depositions to the Protein Data Bank, driven primarily by increased interest in antibodies as biotherapeutics, has led us to implement several improvements to the original database infrastructure. These include the development of SAbDab-nano, a sub-database that tracks nanobodies (heavy chain-only antibodies) which have seen a particular growth in attention from both the academic and pharmaceutical research communities over the past few years. Both SAbDab and SAbDab-nano are updated weekly, comprehensively annotated with the latest features described here, and are freely accessible at opig.stats.ox.ac.uk/webapps/newsabdab/.

Funder

Engineering and Physical Sciences Research Council

UKRI, University of Oxford

Publisher

Oxford University Press (OUP)

Subject

Genetics

Reference18 articles.

1. FDA approves 100th monoclonal antibody product;Mullard;Nat. Rev. Drug Discov.,2021

2. Thera-SAbDab: the Therapeutic Structural Antibody Database;Raybould;Nucleic Acids Res.,2019

3. CoV-AbDab: the coronavirus antibody database;Raybould;Bioinformatics,2021

4. SAbDab: the structural antibody database;Dunbar;Nucleic Acids Res.,2014

5. DLAB: deep learning methods for structure-based virtual screening of antibodies;Schneider;Bioinformatics,2021

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3