Surface sampling for SARS-CoV-2 RNA in workplace outbreak settings in the UK, 2021–22

Author:

Nicholls Ian1ORCID,Spencer Antony1,Chen Yiqun2ORCID,Bennett Allan1,Atkinson Barry1

Affiliation:

1. Research and Evaluation, UK Health Security Agency, Porton Down , Salisbury, SP4 0JG , United Kingdom

2. Science Division, Health and Safety Executive , Buxton, SK17 9JN , United Kingdom

Abstract

Abstract Aims To utilize environmental surface sampling to evaluate areas of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) contamination within workplaces to identify trends and improve local coronavirus disease 2019 (COVID-19) control measures. Methods and results Surface sampling was undertaken at 12 workplaces that experienced a cluster of COVID-19 cases in the workforce between March 2021 and March 2022. A total of 7.4% (61/829) samples collected were positive for SARS-CoV-2 RNA by the quantitative PCR (qPCR) with only 1.8% (15/829) of samples identified with crossing threshold (Ct) values <35.0. No sample returned whole-genome sequence inferring RNA detected was degraded. Conclusions Few workplace surface samples were positive for SARS-CoV-2 RNA and positive samples typically contained low levels of nucleic acid. Although these data may infer a low probability of fomite transmission within the workplace, Ct values may have been lower at the time of contamination. Workplace environmental sampling identified lapses in COVID-19 control measures within individual sites and showed trends throughout the pandemic.

Funder

Health and Safety Executive

Publisher

Oxford University Press (OUP)

Subject

Applied Microbiology and Biotechnology,General Medicine,Biotechnology

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