Phylogenomic Analysis of β-Lactamase in Archaea and Bacteria Enables the Identification of Putative New Members-Reference-Cited by-同舟云学术

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Phylogenomic Analysis of β-Lactamase in Archaea and Bacteria Enables the Identification of Putative New Members

Published:2018-03-05 Issue:4 Volume:10 Page:1106-1114
ISSN:1759-6653
Container-title:Genome Biology and Evolution
language:en
Short-container-title:

Author:

Keshri Vivek¹²,Panda Arup¹,Levasseur Anthony²,Rolain Jean-Marc²,Pontarotti Pierre¹³,Raoult Didier²

Affiliation:

1. Evolution Biologique et Modélisation, I2M, UMR-CNRS 7373, Aix-Marseille Université, France

2. IRD, APHM, MEPHI, IHU Méditerranée Infection, Aix-Marseille Université, France

3. CNRS, IRD, APHM, MEPHI, IHU Méditerranée Infection (Evolutionary Biology Team), Aix-Marseille Université, France

Publisher

Oxford University Press (OUP)

Subject

Genetics,Ecology, Evolution, Behavior and Systematics

Link

http://academic.oup.com/gbe/article-pdf/10/4/1106/24637546/evy028.pdf

Reference29 articles.

1. One origin for metallo-β-lactamase activity, or two? An investigation assessing a diverse set of reconstructed ancestral sequences based on a sample of phylogenetic trees;Alderson;J Mol Evol,2014

2. Functional metagenomics reveals diverse beta-lactamases in a remote Alaskan soil;Allen;ISME J,2009

3. The structure of β-lactamases;Ambler;Philos Trans R Soc Lond B Biol Sci,1980

4. Pfam 3.1: 1313 multiple alignments and profile HMMs match the majority of proteins;Bateman;Nucleic Acids Res,1999

5. Classification of β-lactamases: groups 1, 2a, 2b, and 2b’;Bush;Antimicrob Agents Chemother,1989

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