MetaVelvet: an extension of Velvet assembler to de novo metagenome assembly from short sequence reads
Author:
Affiliation:
1. Department of Biosciences and Informatics, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama 223-8522 and 2 Japan Post Network Co., Ltd. 1-3-2 Kasumigaseki, Chiyoda-ku, Tokyo 100-8798, Japan
Publisher
Oxford University Press (OUP)
Subject
Genetics
Link
http://academic.oup.com/nar/article-pdf/40/20/e155/25346900/gks678.pdf
Reference24 articles.
1. Environmental genome shotgun sequencing of the Sargasso Sea;Venter;Science,2004
2. Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes;Kurokawa;DNA Res.,2007
3. A human gut microbial gene catalogue established by metagenomic sequencing;Qin;Nature,2010
4. Parallel, tag-directed assembly of locally derived short sequence reads;Hiatt;Nat. Methods,2010
5. Bioinformatics for whole-genome shotgun sequencing of microbial communities;Chen;PLoS Comput. Biol.,2005
Cited by 540 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献
1. Visualizing metagenomic and metatranscriptomic data: A comprehensive review;Computational and Structural Biotechnology Journal;2024-12
2. Recent toolset of metagenomics for taxonomical and functional annotation of marine associated viruses: A review;Regional Studies in Marine Science;2024-12
3. Comparative assessment of microbiome and resistome of influent and effluent of sewage treatment plant and common effluent treatment plant located in Delhi, India using shotgun approach;Journal of Environmental Management;2024-10
4. Protocol for the construction and functional profiling of metagenome-assembled genomes for microbiome analyses;STAR Protocols;2024-09
5. A Comparative Study of Microbial Communities, Biogenic Amines, and Volatile Profiles in the Brewing Process of Rice Wines with Hongqu and Xiaoqu as Fermentation Starters;Foods;2024-08-02
1.学者识别学者识别
2.学术分析学术分析
3.人才评估人才评估
"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370
www.globalauthorid.com
TOP
Copyright © 2019-2024 北京同舟云网络信息技术有限公司 京公网安备11010802033243号 京ICP备18003416号-3