OrthoMaM v10: Scaling-Up Orthologous Coding Sequence and Exon Alignments with More than One Hundred Mammalian Genomes
Author:
Affiliation:
1. Institut des Sciences de l’Evolution (ISEM), Univ. Montpellier, CNRS, EPHE, IRD, Montpellier, France
2. AGAP, Univ. Montpellier, CIRAD, INRA, Montpellier SupAgro, Montpellier, France
Abstract
Funder
Agence Nationale de la Recherche “Investissements d’avenir/Bioinformatique”
Labex CeMEB “Centre Méditerranéen de l’Environnement et de la Biodiversité”
European Research Council
Institut des Sciences de l’Evolution de Montpellier
Publisher
Oxford University Press (OUP)
Subject
Genetics,Molecular Biology,Ecology, Evolution, Behavior and Systematics
Link
http://academic.oup.com/mbe/article-pdf/36/4/861/28264279/msz015.pdf
Reference10 articles.
1. OrthoMaM v8: a database of orthologous exons and coding sequences for comparative genomics in mammals;Douzery;Mol Biol Evol,2014
2. Accelerated profile HMM searches;Eddy;PLoS Comput Biol,2011
3. MAFFT multiple sequence alignment software version 7: improvements in performance and usability;Katoh;Mol Biol Evol,2013
4. Pitfalls in supermatrix phylogenomics;Philippe;Eur J Taxon,2017
5. OrthoMaM: a database of orthologous genomic markers for placental mammal phylogenetics;Ranwez;BMC Evol Biol,2007
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