Two Methods for Mapping and Visualizing Associated Data on Phylogeny Using Ggtree-Reference-Cited by-同舟云学术

Two Methods for Mapping and Visualizing Associated Data on Phylogeny Using Ggtree

Published:2018-10-23 Issue:12 Volume:35 Page:3041-3043
ISSN:0737-4038
Container-title:Molecular Biology and Evolution
language:en
Short-container-title:

Author:

Yu Guangchuang¹,Lam Tommy Tsan-Yuk²,Zhu Huachen²³⁴,Guan Yi²³⁴

Affiliation:

1. Institute of Bioinformatics, School of Basic Medical Sciences, Southern Medical University, Guangzhou, Guangdong, China

2. State Key Laboratory of Emerging Infectious Diseases and Centre of Influenza Research, School of Public Health, The University of Hong Kong, Hong Kong SAR, China

3. Joint Institute of Virology (Shantou University–The University of Hong Kong), Shantou University, Shantou, Guangdong, China

4. State Key Laboratory of Emerging Infectious Diseases (HKU Shenzhen Base), Shenzhen Third People’s Hospital, Shenzhen, Guangdong, China

Funder

National Key Plan for Scientific Research and Development of China

Shenzhen Peacock Plan

National Institutes of Health

Publisher

Oxford University Press (OUP)

Subject

Genetics,Molecular Biology,Ecology, Evolution, Behavior and Systematics

Link

http://academic.oup.com/mbe/article-pdf/35/12/3041/26998025/msy194.pdf

Reference3 articles.

1. Evolview v2: an online visualization and management tool for customized and annotated phylogenetic trees;He;Nucleic Acids Res.,2016

2. Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation;Letunic;Bioinformatics,2007

3. ggtree: an r package for visualization and annotation of phylogenetic trees with their covariates and other associated data;Yu;Methods Ecol Evol,2017

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