Graph-based modeling of tandem repeats improves global multiple sequence alignment-Reference-Cited by-同舟云学术

Graph-based modeling of tandem repeats improves global multiple sequence alignment

Published:2013-07-22 Issue:17 Volume:41 Page:e162-e162
ISSN:1362-4962
Container-title:Nucleic Acids Research
language:en
Short-container-title:

Author:

Szalkowski Adam M.¹¹,Anisimova Maria¹¹

Affiliation:

1. Swiss Institute of Bioinformatics, Quartier Sorge Batiment Genopode, 1015 Lausanne, Switzerland and 2 Department of Computer Science, ETH Zürich, Universitätstrasse 6, 8092 Zürich, Switzerland

Publisher

Oxford University Press (OUP)

Subject

Genetics

Link

http://academic.oup.com/nar/article-pdf/41/17/e162/25362086/gkt628.pdf

Reference39 articles.

1. Phylogeny-aware gap placement prevents errors in sequence alignment and evolutionary analysis;Löytynoja;Science,2008

2. Accurate extension of multiple sequence alignments using a phylogeny-aware graph algorithm;Löytynoja;Bioinformatics,2012

3. Finding the balance between the mathematical and biological optima in multiple sequence alignment;Anisimova;Trends Evol. Biol.,2010

4. Global multiple-sequence alignment with repeats;Sammeth;Proteins,2006

5. Multiple alignment of protein sequences with repeats and rearrangements;Phuong;Nucleic Acids Res.,2006

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