Topokaryotyping demonstrates single cell variability and stress dependent variations in nuclear envelope associated domains

Author:

Jurisic Anamarija1,Robin Chloé1,Tarlykov Pavel2ORCID,Siggens Lee3,Schoell Brigitte4,Jauch Anna4,Ekwall Karl3,Sørensen Claus Storgaard5,Lipinski Marc1,Shoaib Muhammad15ORCID,Ogryzko Vasily1

Affiliation:

1. UMR8126, Université Paris-Sud 11, CNRS, Institut de Cancérologie Gustave Roussy, 94805 Villejuif, France

2. National Center for Biotechnology, 01000, Astana, Kazakhstan

3. Department of Biosciences and Nutrition, NOVUM, Karolinska Institutet, Huddinge 141 83, Sweden

4. Institute of Human Genetics, University of Heidelberg, D-69120 Heidelberg, Germany

5. Biotech Research and Innovation Centre (BRIC), Faculty of Health and Medical Sciences, University of Copenhagen, Ole Maaløes Vej 5, 2200 Copenhagen N, Denmark

Funder

Association pour la Recherche sur le Cancer

Ministry of Education and Science of the Republic of Kazakhstan

Wilhelm Sander-Stiftung

Publisher

Oxford University Press (OUP)

Subject

Genetics

Reference60 articles.

1. Initial high-resolution microscopic mapping of active and inactive regulatory sequences proves non-random 3D arrangements in chromatin domain clusters;Cremer;Epigenet. Chromatin,2017

2. Genome architecture: domain organization of interphase chromosomes;Bickmore;Cell,2013

3. Chrom3D: three-dimensional genome modeling from Hi-C and nuclear lamin-genome contacts;Paulsen;Genome Biol.,2017

4. A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping;Rao;Cell,2014

5. High-resolution whole-genome sequencing reveals that specific chromatin domains from most human chromosomes associate with nucleoli;van Koningsbruggen;Mol. Biol. Cell,2010

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