riboSeed: leveraging prokaryotic genomic architecture to assemble across ribosomal regions-Reference-Cited by-同舟云学术

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riboSeed: leveraging prokaryotic genomic architecture to assemble across ribosomal regions

Published:2018-03-28 Issue:11 Volume:46 Page:e68-e68
ISSN:0305-1048
Container-title:Nucleic Acids Research
language:en
Short-container-title:

Author:

Waters Nicholas R¹²^ORCID,Abram Florence¹,Brennan Fiona¹³,Holmes Ashleigh⁴,Pritchard Leighton²

Affiliation:

1. Microbiology, School of Natural Sciences, National University of Ireland, Galway, H91 TK33, Ireland

2. Information and Computational Sciences, James Hutton Institute, Invergowrie, Dundee DD2 5DA, Scotland

3. Soil and Environmental Microbiology, Environmental Research Centre, Teagasc, Johnstown Castle, Wexford, Y35 TC97, Ireland

4. Cell and Molecular Sciences, James Hutton Institute, Invergowrie, Dundee DD2 5DA, Scotland

Publisher

Oxford University Press (OUP)

Subject

Genetics

Link

http://academic.oup.com/nar/article-pdf/46/11/e68/25067182/gky212.pdf

Reference55 articles.

1. Finishing genomes with limited resources: lessons from an ensemble of microbial genomes;Nagarajan;BMC Genomics,2010

2. Current opportunities and challenges of next generation sequencing (NGS) of DNA; determining health and disease;Brouwer;Br. Biotechnol. J.,2016

3. Evaluation and validation of de novo and hybrid assembly techniques to derive high-quality genome sequences;Utturkar;Bioinformatics,2014

4. The sequence read archive: explosive growth of sequencing data;Kodama;Nucleic Acids Res.,2012

5. An analysis of the feasibility of short read sequencing;Whiteford;Nucleic Acids Res.,2005

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