In Silico Options for Assay Validation
Author:
Affiliation:
1. Department of Pathology, St. Jude Children’s Research Hospital , Memphis, TN , United States
Publisher
Oxford University Press (OUP)
Link
https://academic.oup.com/jalm/article-pdf/9/1/180/54973749/jfad099.pdf
Reference14 articles.
1. Validation of a customized bioinformatics pipeline for a clinical next-generation sequencing test targeting solid tumor-associated variants;Schneider;J Mol Diagn,2018
2. Recommendations for the use of in silico approaches for next-generation sequencing bioinformatic pipeline validation: a joint report of the Association for Molecular Pathology, Association for Pathology Informatics, and College of American Pathologists;Duncavage;J Mol Diagn,2023
3. Amplicon indel hunter: a novel bioinformatics tool to detect large somatic insertion/deletion mutations in amplicon-based NGS data;Kadri;J Mol Diagn,2015
4. Insim: in silico mutator software for bioinformatics pipeline validation of clinical next-generation sequencing assays;Patil;J Mol Diagn,2019
5. Simfuse: a novel fusion simulator for RNA sequencing (RNA-Seq) data;Tan;Biomed Res Int,2015
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