NACDDB: Nucleic Acid Circular Dichroism Database

Author:

Cappannini Andrea1ORCID,Mosca Kevin2,Mukherjee Sunandan1ORCID,Moafinejad S Naeim1,Sinden Richard R3,Arluison Veronique24ORCID,Bujnicki Janusz1,Wien Frank5ORCID

Affiliation:

1. Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology in Warsaw , ul. Ks. Trojdena 4, PL-02-109 Warsaw , Poland

2. Université Paris-Saclay , CEA, CNRS, LLB, 91191, Gif-sur-Yvette , France

3. Department of Chemistry, Biology, and Health Sciences, South Dakota School of Mines and Technology , Rapid City, SD 57701 , USA

4. Université Paris Cité , UFR SDV, 75006 Paris , France

5. Synchrotron SOLEIL, L’Orme des Merisiers , Saint Aubin BP 48, 91192, Gif-sur-Yvette , France

Abstract

Abstract The Nucleic Acid Circular Dichroism Database (NACDDB) is a public repository that archives and freely distributes circular dichroism (CD) and synchrotron radiation CD (SRCD) spectral data about nucleic acids, and the associated experimental metadata, structural models, and links to literature. NACDDB covers CD data for various nucleic acid molecules, including DNA, RNA, DNA/RNA hybrids, and various nucleic acid derivatives. The entries are linked to primary sequence and experimental structural data, as well as to the literature. Additionally, for all entries, 3D structure models are provided. All entries undergo expert validation and curation procedures to ensure completeness, consistency, and quality of the data included. The NACDDB is open for submission of the CD data for nucleic acids. NACDDB is available at: https://genesilico.pl/nacddb/.

Funder

European Commission

Polish National Science Center

IIMCB

Publisher

Oxford University Press (OUP)

Subject

Genetics

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