TGS1 impacts snRNA 3′-end processing, ameliorates survival motor neuron-dependent neurological phenotypes in vivo and prevents neurodegeneration

Author:

Chen Lu1234,Roake Caitlin M23,Maccallini Paolo5,Bavasso Francesca5,Dehghannasiri Roozbeh36,Santonicola Pamela7ORCID,Mendoza-Ferreira Natalia8,Scatolini Livia5,Rizzuti Ludovico5,Esposito Alessandro9,Gallotta Ivan9,Francia Sofia1011,Cacchione Stefano5,Galati Alessandra5,Palumbo Valeria5,Kobin Marie A4,Tartaglia Gian Gaetano51213,Colantoni Alessio51213,Proietti Gabriele1213,Wu Yunming414,Hammerschmidt Matthias15,De Pittà Cristiano16ORCID,Sales Gabriele16,Salzman Julia36,Pellizzoni Livio171819,Wirth Brunhilde820ORCID,Di Schiavi Elia79ORCID,Gatti Maurizio521,Artandi Steven E23,Raffa Grazia D5ORCID

Affiliation:

1. Stanford Cancer Institute, Stanford University School of Medicine , Stanford, CA 94305, USA

2. Department of Medicine, Stanford University School of Medicine , Stanford, CA 94305, USA

3. Department of Biochemistry, Stanford University School of Medicine , Stanford, CA 94305, USA

4. Cancer Signaling and Epigenetics Program and Cancer Epigenetics Institute, Institute for Cancer Research , Fox Chase Cancer Center, Philadelphia, PA 19111, USA

5. Dipartimento di Biologia e Biotecnologie, Sapienza University of Rome , Rome, Italy

6. Department of Biomedical Data Science, Stanford University , Stanford, CA 94305, USA

7. Institute of Biosciences and BioResources , IBBR, CNR, Naples, Italy

8. Institute of Human Genetics, Center for Molecular Medicine Cologne, Institute for Genetics , University of Cologne, 50931 Cologne, Germany

9. Institute of Genetics and Biophysics , IGB-ABT, CNR, Naples, Italy

10. IFOM-The FIRC Institute of Molecular Oncology, Milan, Italy

11. Istituto di Genetica Molecolare , CNR-Consiglio Nazionale delle Ricerche, Pavia, Italy

12. Center for Life Nano- & Neuro-Science, Fondazione Istituto Italiano di Tecnologia (IIT) , Rome 00161, Italy

13. Center for Human Technology, Fondazione Istituto Italiano di Tecnologia (IIT) , Genoa 16152, Italy

14. Department of Biology, Howard Hughes Medical Institute, Stanford University , Stanford, CA 94305, USA

15. Institute for Zoology, Developmental Biology, University of Cologne , 50674 Cologne, Germany

16. Department of Biology, University of Padova , Padua, Italy

17. Center for Motor Neuron Biology and Disease, Columbia University , NY 10032, USA

18. Department of Pathology and Cell Biology, Columbia University , NY 10032, USA

19. Department of Neurology, Columbia University , NY 10032, USA

20. Center for Rare Diseases, University Hospital of Cologne , University of Cologne, 50931 Cologne, Germany

21. Istituto di Biologia e Patologia Molecolari (IBPM) del CNR , Rome, Italy

Abstract

Abstract Trimethylguanosine synthase 1 (TGS1) is a highly conserved enzyme that converts the 5′-monomethylguanosine cap of small nuclear RNAs (snRNAs) to a trimethylguanosine cap. Here, we show that loss of TGS1 in Caenorhabditis elegans, Drosophila melanogaster and Danio rerio results in neurological phenotypes similar to those caused by survival motor neuron (SMN) deficiency. Importantly, expression of human TGS1 ameliorates the SMN-dependent neurological phenotypes in both flies and worms, revealing that TGS1 can partly counteract the effects of SMN deficiency. TGS1 loss in HeLa cells leads to the accumulation of immature U2 and U4atac snRNAs with long 3′ tails that are often uridylated. snRNAs with defective 3′ terminations also accumulate in Drosophila Tgs1 mutants. Consistent with defective snRNA maturation, TGS1 and SMN mutant cells also exhibit partially overlapping transcriptome alterations that include aberrantly spliced and readthrough transcripts. Together, these results identify a neuroprotective function for TGS1 and reinforce the view that defective snRNA maturation affects neuronal viability and function.

Funder

Telethon

NIH

AIRC

Ministry of Economy and Finance

Italian Ministry of Health

German Research Foundation

Marie Skłodowska-Curie

Fondazione Cariplo

European Research Council

H2020

Stanford Cancer Institute

MSTP

Publisher

Oxford University Press (OUP)

Subject

Genetics

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